Cells are home to a variety of organelles, each with a specialized role that supports cellular homeostasis. As the largest cellular organelle, the endoplasmic reticulum (ER) plays a coordinating... Show moreCells are home to a variety of organelles, each with a specialized role that supports cellular homeostasis. As the largest cellular organelle, the endoplasmic reticulum (ER) plays a coordinating role in intracellular architecture by communicating with other organelles through membrane contact sites. This thesis describes the function of an ER contact site-localized E3 ubiquitin ligase, RNF26, that controls the positioning of other organelles in space and time. Through a combination of microcopy and biochemistry, we have identified key regulators of RNF26 that together control essential cell biological processes such as growth hormone trafficking and proteostasis in response to cellular stress, and describe the role of the ER and ubiquitination on other processes such as calcium trafficking and antigen presentation. Altogether, this work unravels the molecular machinery central to intracellular architecture and its consequences for organelle biology. Show less
Proteotoxic stress causes profound endoplasmic reticulum (ER) membrane remodeling into a perinuclear quality control compartment (ERQC) for the degradation of misfolded proteins. Subsequent return... Show moreProteotoxic stress causes profound endoplasmic reticulum (ER) membrane remodeling into a perinuclear quality control compartment (ERQC) for the degradation of misfolded proteins. Subsequent return to homeostasis involves clearance of the ERQC by endolysosomes. However, the factors that control perinuclear ER integrity and dynamics remain unclear. Here, we identify vimentin intermediate filaments as perinuclear anchors for the ER and endolysosomes. We show that perinuclear vimentin filaments engage the ER‐embedded RING finger protein 26 (RNF26) at the C‐terminus of its RING domain. This restricts RNF26 to perinuclear ER subdomains and enables the corresponding spatial retention of endolysosomes through RNF26‐mediated membrane contact sites (MCS). We find that both RNF26 and vimentin are required for the perinuclear coalescence of the ERQC and its juxtaposition with proteolytic compartments, which facilitates efficient recovery from ER stress via the Sec62‐mediated ER‐phagy pathway. Collectively, our findings reveal a scaffolding mechanism that underpins the spatiotemporal integration of organelles during cellular proteostasis. Show less
The aim of my work was to identify novel proteins that are involved in different aspects of disease biology, in the hope that we can target these to treat the disease. Using large-scale screening... Show moreThe aim of my work was to identify novel proteins that are involved in different aspects of disease biology, in the hope that we can target these to treat the disease. Using large-scale screening technologies, I found a novel regulator of chemosensitivity to the anti-cancer drugs etoposide and doxorubicin. Furthermore, novel proteins and drugs that target MHCII antigen presentation were picked up. Interestingly, one of these drugs is currently used in the clinic to treat MHCII-dependent autoimmune diseases, but for which the mechanism of action is unknown. Lastly, these screens yielded enzymes that control the dynamics of endosomes in the cell, which can potentially be targeted in cancers that rely on overactivation of growth signaling receptors. Taken together, my work has provided new potential targets for the treatment or classification of several tumor types, as well as a potential mechanism of action for a widely used drug. Show less
