The study of orchid flowers, fruits, and inflorescences is crucial due to the remarkable diversity of orchid species and their unique adaptations to pollinators and seed dispersers. However, our... Show moreThe study of orchid flowers, fruits, and inflorescences is crucial due to the remarkable diversity of orchid species and their unique adaptations to pollinators and seed dispersers. However, our understanding of the evolution and development of these organs within the orchid family remains limited. This research aims to fill this knowledge gap by investigating the genetic mechanisms underlying the evolution and development of floral structures, fruits and resupination in orchids, and the relationship between inflorescence stalk lignification and orientation. The research also includes a methodological chapter on the application of transcriptomics for plant species identification. Using advanced techniques such as microscopy imaging, 3D CT scanning, and anatomical analysis, the study provides detailed insights into the processes of root and fruit resupination and shows that inflorescence lignification is a heritable trait, with closely related orchid species displaying similar levels of lignification compared to distantly related species. The findings significantly advance our understanding of orchid biology by filling gaps in our knowledge of the evolutionary and developmental processes involved in flower and fruit development, resupination, and inflorescence lignification. By identifying specific genes and pathways associated with these traits, the study offers valuable insights into the genetic mechanisms that drive orchid diversity and adaptation. From a practical perspective, these findings hold great promise for the development of new orchid varieties with more robust and visually appealing varieties. The research also highlights the importance of conservation efforts to protect orchid diversity and their ecological relationships with pollinators and seed dispersal vectors. Show less
In this thesis, I targeted the orchid genus Lepanthes, one of the six genera of angiosperms that surpasses 1,000 species in the Neotropics, as a study model to investigate the evolutionary... Show moreIn this thesis, I targeted the orchid genus Lepanthes, one of the six genera of angiosperms that surpasses 1,000 species in the Neotropics, as a study model to investigate the evolutionary processes that promoted species diversifications. To investigate this, we improved the taxonomy of the group integrating a solid phylogenetic framework with morphological evolution, assessing inter-specific relationships in species complexes with hundreds of DNA markers using anchored hybrid enrichment approach, and describing new species. In addition, we addressed the pollination of Trichosalpinx through the study of floral anatomy, pollinator behavior, and floral traits. Trichosalpinx flowers are pollinated exclusively by female biting midges that are attracted by the small quantities of proteins secreted on the flowers. Finally, we inferred the biogeographical history and diversification dynamics of the two largest Neotropical orchid groups (Cymbidieae and Pleurothallidinae), using densely sampled phylogenies coupled with geological datasets and discussed the impact of biogeographical events and orogeny on the species richness of Lepanthes. Species diversification is correlated with Andean orogeny, and multiple migrations and recolonizations across the Andes indicate that mountains do not constrain orchid dispersal over long timescales. This thesis provides new insights into the complex evolution of one of the most species-rich angiosperm. Show less
