Transcriptomic studies in human ageing and longevity

Passtoors, W.M.A. (2013)

Doctoral Thesis

The aim of this thesis was to identify in the human blood transcriptome, relevant pathways and potential biomarker profiles that associate with chronological age and discriminate between __healthy agers__ from long-lived families and normative ageing controls. Such profiles may harbor determinants of the biological ageing rate. We studied genome-wide gene expression profiles in blood of members of the Leiden Longevity Study (LLS) and replicated our findings by extended sampling within the unique LLS cohort. The findings of the exploratory analysis prompted us to investigate multiple genes in the IL7R and MTOR pathways for association with familial longevity. The results obtained by examining mRNA from blood samples brought us to study mTOR protein levels and signalling in primary skin fibroblasts from the corresponding donors in the LLS. Finally, to discover robust, biologically relevant gene networks as markers of chronological ageing in larger sample sizes, we performed an explorative network-based meta-analysis on large publicly available transcriptomic datasets. We have identified several networks, pathways and candidate genes potentially marking the biological age and the rate of ageing

• Transcriptomics
• Gene expression
• IL7R
• ASF1A
• MTOR
• Longevity
• Ageing
• Healthy ageing

• All authors: Passtoors, W.M.A.
• Supervisor: Slagboom, P.E.
• Co-supervisor: Beekman, M.; Boer, J.M.
• Qualification: Doctor (dr.)
• Awarding Institution: Leiden University Medical Center (LUMC), Leiden University
• Date: 2013-12-19
• ISBN (print): 9789088917684
• Sponsorship: Netherlands Consortium for Healthy Ageing (NGI 050060810) and Unilever PLC